ROTIFER#

ROTIFER (Rapid Open-source Tools and Infrastructure For data Exploration and Research) is a multi-language collection of high-level libraries for building data analysis pipelines in comparative genomics and computational analysis of biological sequences, plus command line tools built on that framework.

This site documents the Python package that lives under lib/rotifer in the repository.

Data access

Cursors for biological databases: NCBI, UniProt and local mirrors. The reference example of how ROTIFER modules are documented.

Data access
API reference

The generated reference for every documented module in the package.

API reference
Contributing

How to write docstrings, build this site, keep the design consistent, and find which file controls what.

Contributing
License

The BSD 3-Clause License ROTIFER is distributed under, with unofficial Spanish, French and Portuguese translations.

License